logos csic

Gabriel Moncalián (IP)

Predoc (1994-2000): BSc in Chemical Sciences by the University of Valladolid. Doctoral thesis on the nucleoprotein complex that initiates bacterial conjugation supervised by Dr. Fernando de la Cruz in the Department of Molecular Biology of the University of Cantabria thanks to a MEC fellowship, with short term stays in the laboratories of Dr. Robert T. Sauer at MIT (Cambridge, MA) and Dr. Ellen Zechner at the University of Graz (Austria). Extraordinary doctorate award.

Postdoc 1 (2000-2003): Supervised by Dr. John A. Tainer at the Scripps Research Institute (La Jolla, CA) working on structural biology of DNA Repair.

Postdoc 2 (2003-2004): Supervised by Dr. Jerónimo Bravo at the CNIO (Madrid) working on structural biology of endocytosis.

Ramón y Cajal Contract (2005-2009): Reincorporation to the UC. Start of an independent project on the synthesis of triglycerides and polyunsaturated fatty acids.

Present: Associate Professor of Genetics at the University of Cantabria since 2009 and Principal Investigator of the Protein Design and Engineering Research Group at the Institute of Biomedicine and Biotechnology of Cantabria (IBBTEC) since 2014. In this last stage I have consolidated my research group. PI of different public national research projects and projects with national companies, highlighting the contract with Sniace to develop a zenith-E project for the improvement of bioethanol production. Regular user of the ALBA synchrotron. Coordinator of the master's and doctoral programs in Molecular Biology and Biomedicine and vice-dean of the Faculty of Medicine. I have published 40 articles in international journals (Nature, Cell, NSMB, PNAS, EMBOJ, Angewandte Chemie, etc), a patent for the production of triglycerides in bacteria and I have supervised eight doctoral theses.

​​​​​​​​​​​​​Protein Design and Engineering

​PIs: Gabriel Moncalián & María Lucas Gay



Research Lines

    • Structure, function and modification of polyunsaturated fatty acid synthases.
    • Optimization of the microbial production of added value fatty acids and triglycerides.
    • Optimization of proteins involved in bacterial conjugation for biotechnological applications. 
    • Structure and function of protein complexes involved in intracellular vesicular traffic.
    • Molecular and structural basis of neurodegenerative diseases.
    • Structural basis of Host-Pathogen Interactions.

Services offered 

    • Design and optimization of proteins with biotechnological, biomedical or industrial interest. 
    • Structural analysis of proteins by X-ray crystallography and in silico molecular threading.

Funding

    • EUNICE - European University for Customised Education. 101004083-EUNICE-EAC-A02-2 
    • REUNICE RESEARCH WITH AND FOR SOCIETY IN EUNICE. H2020-IBA-SfS-2-2020-101035813
    • Plataforma de cromatografía acoplada a espectrometría de masas (EQC2021-007113-P) 
    • Microscopio electronico de transmisión de ultima generacion para el análisis estructural de macromoleculas biologicas (EQC2021-007003-P) 
    • Modificación de megasintasas para la producción de precursores químicos sostenibles (TED2021-129278B-I00) 
    • Megasintasas de acidos grasos poliinsaturados: estructura, optimizacion y aplicaciones (PID2021-122164NB-I00)
    • Mecanismo de acción del complejo Retriever (PID2021-122611NB-I00)​

Thraustochytrid PUFA synthase ER domains form a stable heterodimer

Gabriel Moncalián (IP), Nahuel Lofeudo

Journal of Structural Biology: X 2026 Dec


View more

Prokaryotic PfaB is a terminal acyltransferase that determines the final PUFA product

Lofeudo N, Martín A, Jácome M, Wan X, Lucas M, Moncalián G.

​Protein Sci. 2026 Mar;35(3):e70497.​

View more

Selective cargo and membrane recognition by SNX17 regulates its interaction with Retriever

Selective cargo and membrane recognition by SNX17 regulates its interaction with Retriever

Martín-González A, Méndez-Guzmán I, Zabala-Zearreta M, Quintanilla A, García-López A, Martínez-Lombardía E, Albesa-Jové D, Acosta JC, Lucas M.

EMBO Rep 26, 470–493 (2025).

View more

MLDSR, the transcriptional regulator of the major lipid droplets protein MLDS, is controlled by long-chain fatty acids and contributes to the lipid-accumulating phenotype in oleaginous Rhodococcus strains

Hernández MA, Ledesma AE, Moncalián G, Alvarez HM.

​​​FEBS J. 2024 Apr;291(7):1457-1482.​

View more

TOR complex 1 negatively regulates NDR kinase Cbk1 to control cell separation in budding yeast

TOR complex 1 negatively regulates NDR kinase Cbk1 to control cell separation in budding yeast

Foltman M, Mendez I, Bech-Serra JJ, de la Torre C, Brace JL, Weiss EL, Lucas M, Queralt E, Sanchez-Diaz A.

​PLoS Biol. 2023 Aug 30;21(8):e3002263. ​​​​​

View more

Insights into the Binding Mode of Lipid A to the Anti-lipopolysaccharide Factor ALFPm3 from Penaeus monodon: An In Silico Study through MD Simulations

Insights into the Binding Mode of Lipid A to the Anti-lipopolysaccharide Factor ALFPm3 from Penaeus monodon: An In Silico Study through MD Simulations

González-Fernández C, Öhlknecht C, Diem M, Escalona Y, Bringas E, Moncalián G, Oostenbrink C, Ortiz I.

​​J Chem Inf Model. 2023 Apr 24;63(8):2495-2504.

View more

Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors

Structural basis of direct and inverted DNA sequence repeat recognition by helix-turn-helix transcription factors

Fernandez-Lopez R, Ruiz R, Del Campo I, Gonzalez-Montes L, Boer DR, de la Cruz F, Moncalian G.

​Nucleic Acids Res. 2022 Nov 11;50(20):11938-11947

View more

Characterization of the DNA Binding Domain of StbA, A Key Protein of A New Type of DNA Segregation System

Characterization of the DNA Binding Domain of StbA, A Key Protein of A New Type of DNA Segregation System

Quèbre V, Del Campo I, Cuevas A, Siguier P, Rech J, Le PTN, Ton-Hoang B, Cornet F, Bouet JY, Moncalian G, de la Cruz F, Guynet C.

​J Mol Biol. 2022 Oct 15;434(19):167752.

View more

Integrated strategy for the separation of endotoxins from biofluids. LPS capture on newly synthesized protein

Integrated strategy for the separation of endotoxins from biofluids. LPS capture on newly synthesized protein

Basauri A., Fallanza M., Giner-Robles L., Fernandez-Lopez R., Moncalián G., de la Cruz F., Ortiz I.

Separation and Purification Technology. Volume 255, 15 January 2021, 117689



View more

Reprogramming microorganisms for the biosynthesis of astaxanthin via metabolic engineering

Reprogramming microorganisms for the biosynthesis of astaxanthin via metabolic engineering

Wan, X.; Zhou, X-R.; Moncalian, G.; Su, L.; Chen, W-C.; Zhu, H-Z.; Chen, D.; Gong, Y-M.; Huang, F-H. and Deng, Q-C.

Prog Lipid Res. 2021 Jan;81:101083. doi: 10.1016/j.plipres.2020.101083. Epub 2020 Dec 26.


View more

Structure and Mechanism of the Ketosynthase-Chain Length Factor Didomain from a Prototypical Polyunsaturated Fatty Acid Synthase

Santín, O., Yuet, K., Khosla, C. and Moncalián, G.

​Biochemistry. 2020 Dec 22;59(50):4735-4743. doi: 10.1021/acs.biochem.0c00785. Epub 2020 Dec 7.


View more

Structural insights into Pseudomonas aeruginosaType six secretion system exported effector 8.

González-Magaña A, Sainz-Polo MÁ, Pretre G, Çapuni R, Lucas M, Altuna J, Montánchez I, Fucini P, Albesa-Jové D.

​J Struct Biol. 2020 Dec 1;212(3):107651. doi: 10.1016/j.jsb.2020.107651. Epub 2020 Oct 20.

View more

CDC42EP5/BORG3 modulates SEPT9 to promote actomyosin function, migration, and invasion

CDC42EP5/BORG3 modulates SEPT9 to promote actomyosin function, migration, and invasion

Aaron J. Farrugia, Javier Rodríguez, Jose L. Orgaz, María Lucas, Victoria Sanz-Moreno, Fernando Calvo

​J Cell Biol (2020) 219 (9): e201912159. https://doi.org/10.1083/jcb.201912159. Epub 2020 Aug 14

View more

Biochemical interactions between LPS and LPS-binding molecules

Basauri A, González-Fernández C, Fallanza M, Bringas E, Fernandez-Lopez R, Giner L, Moncalián G, de la Cruz F, Ortiz I.

​Crit Rev Biotechnol. 2020 May;40(3):292-305. doi: 10.1080/07388551.2019.1709797. Epub 2020 Jan 13.

View more

ArdC, a ssDNA-binding protein with a metalloprotease domain, overpasses the recipient hsdRMS restriction system broadening conjugation host range

Lorena González-Montes, Irene Del Campo, M Pilar Garcillán-Barcia, Fernando de la Cruz, Gabriel Moncalián

​PLoS Genet. 2020 Apr 29;16(4):e1008750. doi: 10.1371/journal.pgen.1008750. eCollection 2020 Apr.


View more

Identification of Relaxase-DNA Covalent Complexes and DNA Strand Transfer Reaction Products by Polyacrylamide Gel Electrophoresis.

Identification of Relaxase-DNA Covalent Complexes and DNA Strand Transfer Reaction Products by Polyacrylamide Gel Electrophoresis.

Lucas, M. and Moncalian, G.

Methods Mol Biol. 2075:145-156. doi: 10.1007/978-1-4939-9877-7

View more

Regulation of Human Hsc70 ATPase and Chaperone Activities by Apg2: Role of the Acidic Subdomain

Cabrera Y, Dublang L, Fernández-Higuero JA, Albesa-Jové D, Lucas M, Viguera AR, Guerin ME, Vilar JMG, Muga A, Moro F.

​J Mol Biol. 2019 Jan 18; 431(2):444-461. doi: 10.1016/j.jmb.2018.11.026. 

View more

Directed evolution of a bacterial WS/DGAT acyltransferase: improving tDGAT from Thermomonospora curvata.

Santín, O.; Galie, S. and Moncalián, G.

​Protein Eng Des Sel. 32:25-32. doi: 10.1093/protein/gzz011.

View more

fabH deletion increases DHA production in Escherichia coli expressing Pfa genes.

Giner-Robles, L.; Lázaro, B.; de la Cruz, F. and Moncalián, G.

View more

Loading of malonyl-CoA onto tandem acyl carrier protein domains of polyunsaturated fatty acid synthases.

Santín, O. and Moncalián, G.

J Biol Chem. 2018 Aug 10;293(32):12491-12501. doi: 10.1074/jbc.RA118.002443.

View more

RavN is a member of a previously unrecognized group of Legionella pneumophila E3 ubiquitin ligases.

Lin YH, Lucas M, Evans TR, Abascal-Palacios G, Doms AG, Beauchene NA, Rojas AL, Hierro A, Machner MP.

[PubMed]

View more

Molecular mechanism for the subversion of the retromer coat by the Legionella effector RidL.

Romano-Moreno M, Rojas AL, Williamson CD, Gershlick DC, Lucas M, Isupov MN, Bonifacino JS, Machner MP, Hierro A.Proc Natl Acad Sci U S A. 2017 Dec 26;114(52):E11151-E11160. doi:10.1073/pnas.1715361115

PubMed

View more

Heterologous Expression of a Thermophilic Diacylglycerol Acyltransferase Triggers Triglyceride Accumulation in Escherichia coli.

Lázaro, B.; Villa, J.A.; Santín, O.; Cabezas, M.; Milagre, C.D.F.; de la Cruz, F. and Moncalián, G.

​Plos One. 12(4):e0176520. doi: 10.1371/journal.pone.0176520. 

View more

Endosomal Trafficking: Retromer and Retriever Are Relatives in Recycling.

Gershlick DC, Lucas M.

Curr Biol. 2017 Nov 20;27(22):R1233-R1236. 
doi: 10.1016/j.cub.2017.10.004 

View more

Nutrient starvation leading to triglyceride accumulation activates the Entner Doudoroff pathway in Rhodococcus jostii RHA1.

Juárez A, Villa JA, Lanza VF, Lázaro B, de la Cruz F, Álvarez HM and Moncalián G.

Microbial Cell Factories 16,35. doi: 10.1186/s12934-017-0651-7.

View more

Relaxosomes and plasmid transfer in Gram-negative bacteria.

Zechner, E.L.; Moncalián, G. and de la Cruz, F.

Current Topics in Microbiology and Immunology. 413:93-113. doi: 10.1007/978-3-319-75241-9_4.

View more

Retromer

Lucas M, Hierro A. Curr Biol. 2017 Jul 24; 27(14):687-689. doi: 10.1016/j.cub.2017.05.072

[PubMed]

View more

Structural Mechanism for Cargo Recognition by the Retromer Complex.

Lucas M, Gershlick DC, Vidaurrazaga A, Rojas AL, Bonifacino JS, Hierro A. Cell. 2016 Dec 1;167(6):1623-1635. doi: 10.1016/j.cell.2016.10.056

[PubMed]

View more

Design of Novel Relaxase Substrates Based on Rolling Circle Replicases for Bioconjugation to DNA Nanostructures.

Sagredo S, de la Cruz F and Moncalián G.

PLoS One;11:e0152666. doi:0.1371/journal.pone.0152666.

View more

Orthogonal protein assembly on DNA nanostructures using relaxases.

Sagredo,S., Pirzer,T., Rafat, A.A., Goetzfried,M.A., Moncalian, G., Simmel, F.C. and de la Cruz, F.

Sagredo,S., Pirzer,T., Rafat, A.A., Goetzfried,M.A., Moncalian, G., Simmel, F.C. and de la Cruz, F. (2016b).  Orthogonal protein assembly on DNA nanostructures using relaxases. Angewandte Chemie Int. Ed. 55, 4348-52. doi: 10.1002/anie.201510313. IF 11.994. D1 (13/166)

View more

Comparative genomics of the conjugation region of F-like plasmids: five shades of F.

Fernandez Lopez R, De Toro Hernando M, Moncalian G, Garcillán-Barcia MP and de la Cruz F

Fernandez Lopez R, De Toro Hernando M, Moncalian G, Garcillán-Barcia MP and de la Cruz F (2016) Comparative genomics of the conjugation region of F-like plasmids: five shades of F. Front Mol Biosci. doi: 10.3389/fmolb.2016.00071

View more

Concerted action of NIC relaxase and auxiliary protein MobC in RA3 plasmid conjugation.

Godziszewska J, Moncalián G, Cabezas M, Bartosik AA, de la Cruz F, Jagura-Burdzy G. Mol Microbiol. 2016 Aug;101(3):439-56. doi: 10.1111/mmi.13401. Epub 2016 Jun 2.

[PubMed]

View more

Concerted action of NIC relaxase and auxiliary protein MobC in RA3 plasmid conjugation.

Godziszewska J, Moncalián G, Cabezas M, Bartosik AA, de la Cruz F and Jagura-Burdzy G.

Godziszewska J, Moncalián G, Cabezas M, Bartosik AA, de la Cruz F and Jagura-Burdzy G. (2016). Concerted action of NIC relaxase and auxiliary protein MobC in RA3 plasmid conjugation. Mol Microbiol. doi: 10.1111/mmi.13401.

View more

Effect of cerulenin on fatty acid composition and gene expression pattern of DHA-producing strain Colwellia psychrerythraea strain 34H.

Wan, X.; Peng, Y-F.; Zhou, X-R.; Gong, Y-M.; Huang, F-H. and Moncalian, G.

Wan, X.; Peng, Y-F.; Zhou, X-R.; Gong, Y-M.; Huang, F-H. and Moncalian, G. (2016). Effect of cerulenin on fatty acid composition and gene expression pattern of DHA-producing strain Colwellia psychrerythraea strain 34H. Microbial Cell Factories  15, 30. doi: 10.1186/s12934-016-0431-9.

View more

Physiological and genetic differences among Rhodococcus species for using glycerol as a source for growth and triacylglycerol production.

Herrero, M.O, Moncalian, G. and Alvarez, H.M.

Herrero, M.O, Moncalian, G. and Alvarez, H.M.(2016). Physiological and genetic differences among Rhodococcus species for using glycerol as a source for growth and triacylglycerol production.  Microbiology 162, 384-97. doi: 10.1099/mic.0.000232. 

View more

Transcription factor-based biosensors enlightened by the analyte.

Fernández-López R, Ruiz R, de la Cruz F, Moncalián G.

Fernández-López R, Ruiz R, de la Cruz F, Moncalián G. (2015) Transcription factor-based biosensors enlightened by the analyte. Front Microbiol. 6:648. doi: 10.3389/fmicb.2015.00648. 

View more

Structural basis for the recruitment and activation of the Legionella phospholipase VipD by the host GTPase Rab5.

Lucas M, Gaspar AH, Pallara C, Rojas AL, Fernández-Recio J, Machner MP, Hierro A. Proc Natl Acad Sci U S A. 2014, Aug 26; 111(34):E3514-23. doi: 10.1073/pnas.1405391111

[PubMed]

View more

A high security double lock and key mechanism in HUH relaxases controls oriT-processing for plasmid conjugation.

Carballeira JD, González-Pérez B, Moncalián G, de la Cruz F. Nucleic Acids Res. 2014;42(16):10632-43. doi: 10.1093/nar/gku741.

[pubmed]

View more

Use of limited proteolysis and mutagenesis to identify folding domains and sequence motifs critical for wax ester synthase/acyl coenzyme A:diacylglycerol acyltransferase activity.

Villa JA, Cabezas M, de la Cruz F, Moncalián G. Appl Environ Microbiol. 2014 Feb;80(3):1132-41. doi: 10.1128/AEM.03433-13.

[pubmed]

View more

Use of limited proteolysis and mutagenesis to identify folding domains and sequence motifs critical for wax ester synthase/acyl coenzyme A:diacylglycerol acyltransferase activity.

Villa JA, Cabezas M, de la Cruz F, Moncalián G. Appl Environ Microbiol. 2014 Feb;80(3):1132-41. doi: 10.1128/AEM.03433-13.

[pubmed]

View more

Breaking and joining single-stranded DNA: the HUH endonuclease superfamily.

Chandler M, de la Cruz F, Dyda F, Hickman AB, Moncalian G, Ton-Hoang B. Nat Rev Microbiol. 2013 Aug;11(8):525-38. doi: 10.1038/nrmicro3067.

[pubmed]

View more

Catalytic domain of plasmid pAD1 relaxase TraX defines a group of relaxases related to restriction endonucleases.

Francia MV, Clewell DB, de la Cruz F, Moncalián G. Proc Natl Acad Sci U S A. 2013 Aug 13;110(33):13606-11. doi: 10.1073/pnas.1310037110. Epub 2013 Jul 31.

[pubmed]

View more

Interaction between relaxase MbeA and accessory protein MbeC of the conjugally mobilizable plasmid ColE1.

Varsaki A, Lamb HK, Eleftheriadou O, Vandera E, Thompson P, Moncalián G, de la Cruz F, Hawkins AR, Drainas C. FEBS Lett. 2012 Mar 23;586(6):675-9.

[pubmed]

View more

The Mre11:Rad50 structure shows an ATP-dependent molecular clamp in DNA double-strand break repair.

Lammens K, Bemeleit DJ, Möckel C, Clausing E, Schele A, Hartung S, Schiller CB, Lucas M, Angermüller C, Söding J, Sträßer K, Hopfner KP. Cell. 2011 Apr1; 145(1):54-66. doi: 10.1016/j.cell.2011.02.038

[PubMed]

View more

Purification, crystallization and preliminary crystallographic analysis of the CBS domain protein MJ1004 from Methanocaldococcus jannaschii.

Oyenarte I, Lucas M, Gomez-García I, Martínez-Cruz LA. Acta Crystallogr Sect F, 2011 Mar 1; 67(3):318-24. doi: 10.1107/S1744309110053479

[PubMed]

View more

Relaxase DNA binding and cleavage are two distinguishable steps in conjugative DNA processing that involve different sequence elements of the nic site.

Lucas M, Gonzalez-Perez B, Cabezas M, Moncalián G, Rivas G, de la Cruz F. J Biol Chem. 2010 Mar 19; 285(12):8918-26. doi: 10.1074/jbc.M109.057539

[PubMed]

View more

Binding of S-Methyl-5'-Thioadenosine and S-Adenosyl-l-Methionine to Protein MJ0100 Triggers an Open-to-Closed Conformational Change in Its CBS Motif Pair.

Lucas M, Encinar JA, Arribas EA, Oyenarte I, García IG, Kortazar D, Fernández JA, Mato JM, Martínez-Chantar ML, Martínez-Cruz LA. J Mol Biol. 2010 feb 26; 396(3):800-20. doi: 10.1016/j.jmb.2009.12.012

[PubMed]

View more

The CBS domain protein MJ0729 of Methanocaldococcus jannaschii is a thermostable protein with a pH-dependent self-oligomerization.

Martínez-Cruz LA, Encinar JA, Kortazar D, Prieto J, Gómez J, Fernández-Millán P, Lucas M, Arribas EA, Fernández JA, Martínez-Chantar ML, Mato JM, Neira JL. Biochemistry. 2009 Mar 31; 48(12):2760-76. doi: 10.1021/bi801920r

[PubMed]

View more

Purification, crystallization and preliminary X-ray diffraction analysis of the CBS-domain pair from the Methanococcus jannaschii protein MJ0100.

Lucas M, Kortazar D, Astigarraga E, Fernández JA, Mato JM, Martínez-Chantar ML, Martínez-Cruz LA. Acta Crystallogr Sect F. 2008 Oct 1;64(10):936-41. doi: 10.1107/S1744309108027930

[PubMed]

View more

Crystallization and preliminary crystallographic analysis of merohedrally twinned crystals of MJ0729, a CBS-doman protein from Methanococcus jannaschii.

Fernández-Millán P, Kortazar D, Lucas M, Martínez-Chantar ML, Astigarraga-Arribas E, Fernández JA, Albert A, Mato JM, Martínez-Cruz LA.

Acta Crystallogr Sect F. 2008 Jul 1;64(7):605-9.​ [PubMed]

View more

María Lucas Gay (IP)

View more

Pedro Albendea Pérez

View more

Pablo Duque Dorado

View more

Nahuel Ismael Lofeudo Álvarez

View more

Iván Méndez Guzmán

View more