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JMJD3 intrinsically disordered region links the 3D-genome structure to TGFß-dependent transcription activation [Dataset]

Supplementary Movie S1. FRAPexperiment in which the quick recovery of mEGFP-JMJD3 puncta after photobleaching is observed. Supplementary Movie S2. FRAP experiment in which the aggregation of mEGFP-JMJD3 is appreciated by means of a reduced mobility after photobleaching. Supplementary Data file 1. Table depicting the parameters that assess the quality of the Chst8 4C-seq experiments for each sample as previously described. Briefly, the % of reads containing VP sequence should be above 90, the % of fragments that map in cis above 50, and the % of reads that map in unique sites within 1Mb around VP above 60. Supplementary Data file 2 and 3. Tables containing the quality measurements for each sample of the Ldlrad4 4C-seq (2) and Aopep 4C-seq (3) experiments, according to the parameters previously described. Briefly, the % of reads containing VP sequence should be above 90, the % of fragments that map in cis above 50, and the % of reads that map in unique sites within 1Mb around VP above 60.

Repository: Digital CSIC

 Year of publication: 2022

 Full citation: Vicioso Mantis, M., Fueyo, R., Navarro, C., Cruz-Molina, S., Ijcken, W. F. J.van., Rebollo, E., Rada-Iglesias, A. & Martínez-Balbás, M., (2022). JMJD3 intrinsically disordered region links the 3D-genome structure to TGF?-dependent transcription activation. [Dataset]. (Version 1). Digital CSIC. http://hdl.handle.net/10261/331502

Authorship

VICIOSO MANTIS, MARTA

FUEYO, RAQUEL

NAVARRO, CLAUDIA

CRUZ-MOLINA, SARA

IJCKEN, WILFRED F. J.VAN

REBOLLO, ELENA

MARTÍNEZ-BALBÁS, MARIAN

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