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Abstract: AccNET (Accessory genome Constellation Network) is a Perl application that aims to compare accessory genomes of a large number of genomic units, both at qualitative and quantitative levels. Using the proteomes extracted from the analysed genomes, AccNET creates a bipartite network compatible with standard network analysis platforms. AccNET allows merging phylogenetic and functional information about the concerned genomes, thus improving the capability of current methods of network analysis. The AccNET bipartite network opens a new perspective to explore the pangenome of bacterial species, focusing on the accessory genome behind the idiosyncrasy of a particular strain and/or population.
Fuente: Bioinformatics, 2017, 33(2), 283-285
Editorial: Oxford University Press
Año de publicación: 2017
Nº de páginas: 2
Tipo de publicación: Artículo de Revista
DOI: 10.1093/bioinformatics/btw601
ISSN: 1367-4803,1367-4811
Url de la publicación: https://doi.org/10.1093/bioinformatics/btw601
Leer publicación
LANZA, VAL F.
BAQUERO, FERNANDO
FERNANDO DE LA CRUZ CALAHORRA
COQUE, TERESA M.
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